PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK36946.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family WRKY
Protein Properties Length: 342aa    MW: 38436.4 Da    PI: 6.1204
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK36946.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.35.7e-27146206259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D y+WrKYGqKe+ +++fprsY+rCt++   gC+++k+v+++++dp++ +itY g+H+++
  KFK36946.1 146 EDIYAWRKYGQKEILNTKFPRSYFRCTHKptqGCKATKQVQKQEQDPEMYQITYIGHHTCT 206
                 8***************************9999***************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.1E-26132206IPR003657WRKY domain
SuperFamilySSF1182909.55E-24138206IPR003657WRKY domain
PROSITE profilePS5081120.862140208IPR003657WRKY domain
SMARTSM007745.8E-37145207IPR003657WRKY domain
PfamPF031062.5E-25146205IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009751Biological Processresponse to salicylic acid
GO:0031347Biological Processregulation of defense response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MDSNSNNNTK SIKRKVFEHL VEGHEFTTQL QLLLSHQHSD NHNQTRMVPC DPDPVVVELV  60
SKILGTFHKT ISVLECFDPV TDVTVPIAVE GSRNASCGDD SSAPASCNGG DSGDSKKRLG  120
VAKGKRGCYT RKKRSHTWTV EAKRIEDIYA WRKYGQKEIL NTKFPRSYFR CTHKPTQGCK  180
ATKQVQKQEQ DPEMYQITYI GHHTCTATDV QTQAKTEPFD NEIIMDSDNT MAATIATDHV  240
NATVQEQENN ISSVTVVGAS TVKEEENHNG ESKEYCEASS TCQDLSLVWH HDMPMFDDHQ  300
LNHQNHYYCG GNSTTSHNFV FDNDQFSSLF DSYCSYEGTS AM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115133KKRLGVAKGKRGCYTRKKR
2131135KKRSH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002881532.11e-174predicted protein
RefseqXP_002881736.11e-174WRKY DNA-binding protein 54
SwissprotQ93WU81e-172WRK54_ARATH; Probable WRKY transcription factor 54
TrEMBLA0A087H4940.0A0A087H494_ARAAL; Uncharacterized protein
STRINGAl_scaffold_0004_23051e-173(Arabidopsis lyrata)
STRINGfgenesh1_pm.C_scaffold_40018181e-173(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM113621631
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.11e-163WRKY DNA-binding protein 54